Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 KRT16P1-201ENST00000399124 1418 ntBASIC18.6■□□□□ 0.57
RNF44Q7L0R7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 AC073130.3-201ENST00000624389 2278 ntBASIC18.6■□□□□ 0.57
RNF44Q7L0R7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 FAM197Y1-201ENST00000421178 764 ntBASIC18.6■□□□□ 0.57
RNF44Q7L0R7 TSPY7P-201ENST00000431358 1114 ntBASIC18.6■□□□□ 0.57
RNF44Q7L0R7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF44Q7L0R7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF44Q7L0R7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF44Q7L0R7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF44Q7L0R7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF44Q7L0R7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF44Q7L0R7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.58■□□□□ 0.56
RNF44Q7L0R7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 MIR4785-201ENST00000585005 73 ntBASIC18.58■□□□□ 0.56
RNF44Q7L0R7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 CR392000.1-201ENST00000624770 1228 ntBASIC18.58■□□□□ 0.56
RNF44Q7L0R7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF44Q7L0R7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms