Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 HLA-B-256ENST00000639848 1089 ntBASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFPL4BQ6ZWI9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 AC092368.3-202ENST00000574180 1591 ntBASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 AC060766.5-201ENST00000590539 871 ntBASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 KRT8P20-201ENST00000423953 1409 ntBASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 KRT8P17-201ENST00000453110 1448 ntBASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFPL4BQ6ZWI9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 BX119927.1-201ENST00000636596 1552 ntBASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFPL4BQ6ZWI9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 AC112907.3-201ENST00000577781 2400 ntBASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 HLA-G-202ENST00000376815 851 ntBASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 HLA-G-203ENST00000376818 1127 ntBASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 PNMA6B-201ENST00000538162 1200 ntBASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.27■□□□□ 0.36
RFPL4BQ6ZWI9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFPL4BQ6ZWI9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFPL4BQ6ZWI9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RFPL4BQ6ZWI9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFPL4BQ6ZWI9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms