Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 Z99916.2-201ENST00000604037 246 ntBASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 AL353708.3-201ENST00000610272 989 ntBASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 C1QL1P1-201ENST00000568105 661 ntBASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39BQ5VTQ0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 AF186192.3-201ENST00000583427 947 ntBASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 AL049637.2-201ENST00000641778 930 ntBASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC39BQ5VTQ0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39BQ5VTQ0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms