Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 AL031598.1-201ENST00000561511 1773 ntBASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 AC080038.1-201ENST00000611274 1154 ntBASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 MIR5787-201ENST00000611784 55 ntBASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIF1Q5T3J3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
LRIF1Q5T3J3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 AC092437.1-201ENST00000624794 1048 ntBASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 FP475955.4-201ENST00000623131 1990 ntBASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 AC124283.5-201ENST00000624661 1809 ntBASIC18.26■□□□□ 0.51
LRIF1Q5T3J3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 CDCA4P2-201ENST00000441182 718 ntBASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIF1Q5T3J3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 KRT8P8-201ENST00000434750 1448 ntBASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 AIRN-201ENST00000601203 4374 ntBASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 YBX1P10-201ENST00000444752 975 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms