Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 AC092338.2-201ENST00000568827 1415 ntBASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AC112907.3-201ENST00000577781 2400 ntBASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 CCR12P-201ENST00000446203 998 ntBASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 AL138966.2-201ENST00000621997 464 ntBASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNFT1Q5M7Z0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 TCF3P1-201ENST00000423021 1937 ntBASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNFT1Q5M7Z0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 BX664615.1-201ENST00000443558 458 ntBASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 CKBP1-201ENST00000565489 1086 ntBASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNFT1Q5M7Z0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 AK4P3-201ENST00000418260 669 ntBASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 AC117947.1-201ENST00000427448 529 ntBASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms