Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 AC069152.1-201ENST00000438030 544 ntBASIC18.66■□□□□ 0.58
HMGCS1Q01581 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 AC120498.8-201ENST00000614275 531 ntBASIC18.66■□□□□ 0.58
HMGCS1Q01581 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 AL049812.1-201ENST00000432563 2267 ntBASIC18.66■□□□□ 0.58
HMGCS1Q01581 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS1Q01581 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMGCS1Q01581 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 AL161938.1-201ENST00000569833 2180 ntBASIC18.65■□□□□ 0.58
HMGCS1Q01581 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 AC133041.1-202ENST00000642053 222 ntBASIC18.65■□□□□ 0.58
HMGCS1Q01581 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCS1Q01581 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS1Q01581 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HMGCS1Q01581 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCS1Q01581 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCS1Q01581 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCS1Q01581 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCS1Q01581 SDHAP1-207ENST00000440850 2000 ntBASIC18.64■□□□□ 0.57
HMGCS1Q01581 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
HMGCS1Q01581 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 AC141586.3-201ENST00000562166 1838 ntBASIC18.63■□□□□ 0.57
HMGCS1Q01581 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCS1Q01581 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCS1Q01581 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms