Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBA52P62987 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
UBA52P62987 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBA52P62987 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBA52P62987 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 AC092720.2-201ENST00000602388 1665 ntBASIC16.67■□□□□ 0.26
UBA52P62987 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 AL355472.2-201ENST00000422958 438 ntBASIC16.67■□□□□ 0.26
UBA52P62987 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.67■□□□□ 0.26
UBA52P62987 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.67■□□□□ 0.26
UBA52P62987 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.67■□□□□ 0.26
UBA52P62987 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.67■□□□□ 0.26
UBA52P62987 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UBA52P62987 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBA52P62987 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBA52P62987 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
UBA52P62987 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.66■□□□□ 0.26
UBA52P62987 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.66■□□□□ 0.26
UBA52P62987 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.66■□□□□ 0.26
UBA52P62987 CDV3P1-201ENST00000471403 739 ntBASIC16.66■□□□□ 0.26
UBA52P62987 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
UBA52P62987 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 AC060766.5-201ENST00000590539 871 ntBASIC16.66■□□□□ 0.26
UBA52P62987 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.66■□□□□ 0.26
UBA52P62987 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.66■□□□□ 0.26
UBA52P62987 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA52P62987 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.65■□□□□ 0.26
UBA52P62987 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UBA52P62987 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 AC245052.3-201ENST00000450182 901 ntBASIC16.65■□□□□ 0.26
UBA52P62987 UBE2SP1-201ENST00000450587 669 ntBASIC16.65■□□□□ 0.26
UBA52P62987 AC008550.1-201ENST00000511500 884 ntBASIC16.65■□□□□ 0.26
UBA52P62987 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 AC100791.3-201ENST00000617619 330 ntBASIC16.65■□□□□ 0.26
UBA52P62987 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBA52P62987 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBA52P62987 AL032819.2-201ENST00000624543 2162 ntBASIC16.65■□□□□ 0.26
UBA52P62987 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA52P62987 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA52P62987 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBA52P62987 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.64■□□□□ 0.25
UBA52P62987 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBA52P62987 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
UBA52P62987 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms