Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPS4XP62701 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.5■□□□□ 0.39
RPS4XP62701 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.5■□□□□ 0.39
RPS4XP62701 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RPS4XP62701 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.5■□□□□ 0.39
RPS4XP62701 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.5■□□□□ 0.39
RPS4XP62701 RPPH1-201ENST00000516869 333 ntBASIC17.5■□□□□ 0.39
RPS4XP62701 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.5■□□□□ 0.39
RPS4XP62701 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.5■□□□□ 0.39
RPS4XP62701 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.5■□□□□ 0.39
RPS4XP62701 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 AL020996.1-203ENST00000536896 2307 ntBASIC17.5■□□□□ 0.39
RPS4XP62701 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 AC141586.3-201ENST00000562166 1838 ntBASIC17.49■□□□□ 0.39
RPS4XP62701 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPS4XP62701 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RPS4XP62701 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4XP62701 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4XP62701 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4XP62701 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 AC120498.8-201ENST00000614275 531 ntBASIC17.49■□□□□ 0.39
RPS4XP62701 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4XP62701 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4XP62701 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4XP62701 TEX21P-204ENST00000641479 1693 ntBASIC17.48■□□□□ 0.39
RPS4XP62701 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RPS4XP62701 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS4XP62701 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RPS4XP62701 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RPS4XP62701 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS4XP62701 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RPS4XP62701 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RPS4XP62701 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS4XP62701 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.48■□□□□ 0.39
RPS4XP62701 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.48■□□□□ 0.39
RPS4XP62701 RN7SL471P-201ENST00000580476 299 ntBASIC17.48■□□□□ 0.39
RPS4XP62701 AL121829.2-201ENST00000620908 328 ntBASIC17.48■□□□□ 0.39
RPS4XP62701 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS4XP62701 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS4XP62701 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4XP62701 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 KRT8P8-201ENST00000434750 1448 ntBASIC17.47■□□□□ 0.39
RPS4XP62701 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms