Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
AP1S1P61966 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AP1S1P61966 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
AP1S1P61966 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.54■□□□□ 0.72
AP1S1P61966 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.54■□□□□ 0.72
AP1S1P61966 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
AP1S1P61966 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.54■□□□□ 0.72
AP1S1P61966 TSPY7P-201ENST00000431358 1114 ntBASIC19.54■□□□□ 0.72
AP1S1P61966 AL355355.2-201ENST00000442321 338 ntBASIC19.54■□□□□ 0.72
AP1S1P61966 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.54■□□□□ 0.72
AP1S1P61966 NUDT16P1-203ENST00000513809 620 ntBASIC19.54■□□□□ 0.72
AP1S1P61966 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.54■□□□□ 0.72
AP1S1P61966 AC026471.5-201ENST00000615068 467 ntBASIC19.54■□□□□ 0.72
AP1S1P61966 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.54■□□□□ 0.72
AP1S1P61966 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.54■□□□□ 0.72
AP1S1P61966 AL158211.5-201ENST00000623583 2518 ntBASIC19.54■□□□□ 0.72
AP1S1P61966 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP1S1P61966 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 KRT17P2-201ENST00000300992 1314 ntBASIC19.53■□□□□ 0.72
AP1S1P61966 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.53■□□□□ 0.72
AP1S1P61966 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
AP1S1P61966 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.53■□□□□ 0.72
AP1S1P61966 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
AP1S1P61966 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
AP1S1P61966 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.53■□□□□ 0.72
AP1S1P61966 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 Z85996.1-201ENST00000494644 937 ntBASIC19.53■□□□□ 0.72
AP1S1P61966 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.53■□□□□ 0.72
AP1S1P61966 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.53■□□□□ 0.72
AP1S1P61966 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP1S1P61966 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AP1S1P61966 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.52■□□□□ 0.72
AP1S1P61966 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.52■□□□□ 0.72
AP1S1P61966 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
AP1S1P61966 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
AP1S1P61966 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
AP1S1P61966 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 AL596275.1-201ENST00000423464 877 ntBASIC19.52■□□□□ 0.72
AP1S1P61966 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.52■□□□□ 0.72
AP1S1P61966 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.52■□□□□ 0.72
AP1S1P61966 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.52■□□□□ 0.72
AP1S1P61966 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.52■□□□□ 0.72
AP1S1P61966 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP1S1P61966 LINC01465-201ENST00000408887 1940 ntBASIC19.52■□□□□ 0.72
AP1S1P61966 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
AP1S1P61966 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.51■□□□□ 0.71
AP1S1P61966 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
AP1S1P61966 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
AP1S1P61966 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
AP1S1P61966 AC116562.2-201ENST00000507042 360 ntBASIC19.51■□□□□ 0.71
AP1S1P61966 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.51■□□□□ 0.71
AP1S1P61966 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.51■□□□□ 0.71
AP1S1P61966 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
AP1S1P61966 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.51■□□□□ 0.71
AP1S1P61966 FSCN1P1-201ENST00000568912 1481 ntBASIC19.51■□□□□ 0.71
AP1S1P61966 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
AP1S1P61966 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
AP1S1P61966 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms