Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CKS1BP61024 AC116050.2-201ENST00000612102 1779 ntBASIC13.54□□□□□ -0.24
CKS1BP61024 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.54□□□□□ -0.24
CKS1BP61024 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.54□□□□□ -0.24
CKS1BP61024 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 AL355001.2-201ENST00000620617 1191 ntBASIC13.54□□□□□ -0.24
CKS1BP61024 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
CKS1BP61024 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 AC079598.2-202ENST00000546624 1451 ntBASIC13.54□□□□□ -0.24
CKS1BP61024 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS1BP61024 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 TCF3P1-201ENST00000423021 1937 ntBASIC13.53□□□□□ -0.24
CKS1BP61024 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.53□□□□□ -0.24
CKS1BP61024 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.53□□□□□ -0.24
CKS1BP61024 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.53□□□□□ -0.24
CKS1BP61024 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 AC091305.1-201ENST00000479476 895 ntBASIC13.53□□□□□ -0.24
CKS1BP61024 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.53□□□□□ -0.24
CKS1BP61024 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 AC012414.1-201ENST00000556676 535 ntBASIC13.53□□□□□ -0.24
CKS1BP61024 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.53□□□□□ -0.24
CKS1BP61024 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 AC106739.1-201ENST00000617035 715 ntBASIC13.53□□□□□ -0.24
CKS1BP61024 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.53□□□□□ -0.24
CKS1BP61024 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.53□□□□□ -0.24
CKS1BP61024 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CKS1BP61024 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CKS1BP61024 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CKS1BP61024 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CKS1BP61024 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CKS1BP61024 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
CKS1BP61024 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
CKS1BP61024 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CKS1BP61024 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CKS1BP61024 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CKS1BP61024 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CKS1BP61024 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.52□□□□□ -0.25
CKS1BP61024 AP001330.3-201ENST00000520123 633 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms