Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC073195.1-201ENST00000607241 877 ntBASIC17.58■□□□□ 0.4
SUMO3P55854 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.58■□□□□ 0.4
SUMO3P55854 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SUMO3P55854 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.58■□□□□ 0.4
SUMO3P55854 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.58■□□□□ 0.4
SUMO3P55854 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SUMO3P55854 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.58■□□□□ 0.4
SUMO3P55854 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.58■□□□□ 0.4
SUMO3P55854 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SUMO3P55854 AC093484.2-201ENST00000580996 2166 ntBASIC17.57■□□□□ 0.4
SUMO3P55854 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.57■□□□□ 0.4
SUMO3P55854 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SUMO3P55854 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 AC012618.2-201ENST00000428058 849 ntBASIC17.57■□□□□ 0.4
SUMO3P55854 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SUMO3P55854 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.57■□□□□ 0.4
SUMO3P55854 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.57■□□□□ 0.4
SUMO3P55854 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.57■□□□□ 0.4
SUMO3P55854 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.57■□□□□ 0.4
SUMO3P55854 AC026271.3-201ENST00000571884 352 ntBASIC17.57■□□□□ 0.4
SUMO3P55854 AP001412.1-201ENST00000608405 714 ntBASIC17.57■□□□□ 0.4
SUMO3P55854 AC131212.4-201ENST00000623606 975 ntBASIC17.57■□□□□ 0.4
SUMO3P55854 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.57■□□□□ 0.4
SUMO3P55854 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUMO3P55854 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SUMO3P55854 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.56■□□□□ 0.4
SUMO3P55854 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.56■□□□□ 0.4
SUMO3P55854 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SUMO3P55854 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SUMO3P55854 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.56■□□□□ 0.4
SUMO3P55854 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.56■□□□□ 0.4
SUMO3P55854 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.56■□□□□ 0.4
SUMO3P55854 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUMO3P55854 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
SUMO3P55854 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SUMO3P55854 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.55■□□□□ 0.4
SUMO3P55854 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.55■□□□□ 0.4
SUMO3P55854 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.55■□□□□ 0.4
SUMO3P55854 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.55■□□□□ 0.4
SUMO3P55854 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.55■□□□□ 0.4
SUMO3P55854 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.55■□□□□ 0.4
SUMO3P55854 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.55■□□□□ 0.4
SUMO3P55854 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUMO3P55854 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SUMO3P55854 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.54■□□□□ 0.4
SUMO3P55854 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms