Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDH13P55290 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 ZNF815P-204ENST00000434898 1737 ntBASIC18.94■□□□□ 0.62
CDH13P55290 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH13P55290 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH13P55290 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH13P55290 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH13P55290 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH13P55290 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH13P55290 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH13P55290 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 AC092368.3-202ENST00000574180 1591 ntBASIC18.93■□□□□ 0.62
CDH13P55290 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH13P55290 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
CDH13P55290 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH13P55290 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH13P55290 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH13P55290 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH13P55290 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH13P55290 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH13P55290 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.93■□□□□ 0.62
CDH13P55290 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH13P55290 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDH13P55290 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH13P55290 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH13P55290 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH13P55290 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH13P55290 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.92■□□□□ 0.62
CDH13P55290 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH13P55290 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH13P55290 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH13P55290 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH13P55290 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH13P55290 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH13P55290 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.92■□□□□ 0.62
CDH13P55290 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH13P55290 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH13P55290 MIR4758-201ENST00000577688 71 ntBASIC18.92■□□□□ 0.62
CDH13P55290 MYC-209ENST00000641252 345 ntBASIC18.92■□□□□ 0.62
CDH13P55290 AC141586.3-201ENST00000562166 1838 ntBASIC18.92■□□□□ 0.62
CDH13P55290 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH13P55290 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH13P55290 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CDH13P55290 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH13P55290 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms