Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDKN2DP55273 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDKN2DP55273 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKN2DP55273 AP003097.1-201ENST00000530657 1135 ntBASIC19.15■□□□□ 0.66
CDKN2DP55273 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKN2DP55273 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKN2DP55273 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKN2DP55273 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDKN2DP55273 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKN2DP55273 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDKN2DP55273 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKN2DP55273 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDKN2DP55273 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKN2DP55273 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKN2DP55273 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKN2DP55273 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
CDKN2DP55273 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.14■□□□□ 0.66
CDKN2DP55273 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.14■□□□□ 0.66
CDKN2DP55273 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
CDKN2DP55273 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.14■□□□□ 0.65
CDKN2DP55273 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CDKN2DP55273 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.14■□□□□ 0.65
CDKN2DP55273 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 AC233263.1-201ENST00000578059 224 ntBASIC19.14■□□□□ 0.65
CDKN2DP55273 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CDKN2DP55273 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKN2DP55273 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKN2DP55273 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKN2DP55273 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.13■□□□□ 0.65
CDKN2DP55273 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.13■□□□□ 0.65
CDKN2DP55273 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKN2DP55273 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CDKN2DP55273 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKN2DP55273 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKN2DP55273 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 AC093503.3-201ENST00000624917 2352 ntBASIC19.12■□□□□ 0.65
CDKN2DP55273 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.12■□□□□ 0.65
CDKN2DP55273 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDKN2DP55273 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CDKN2DP55273 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms