Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA4P54764 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA4P54764 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
EPHA4P54764 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA4P54764 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA4P54764 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA4P54764 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA4P54764 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EPHA4P54764 TERF1P1-201ENST00000311003 1181 ntBASIC18.67■□□□□ 0.58
EPHA4P54764 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA4P54764 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA4P54764 AL137013.1-201ENST00000432946 1228 ntBASIC18.67■□□□□ 0.58
EPHA4P54764 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.67■□□□□ 0.58
EPHA4P54764 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA4P54764 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA4P54764 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA4P54764 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA4P54764 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHA4P54764 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHA4P54764 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.66■□□□□ 0.58
EPHA4P54764 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHA4P54764 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 SLC25A1P2-201ENST00000430693 912 ntBASIC18.66■□□□□ 0.58
EPHA4P54764 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.66■□□□□ 0.58
EPHA4P54764 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHA4P54764 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA4P54764 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EPHA4P54764 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA4P54764 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA4P54764 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA4P54764 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA4P54764 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA4P54764 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA4P54764 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EPHA4P54764 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.65■□□□□ 0.58
EPHA4P54764 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA4P54764 CCR12P-201ENST00000446203 998 ntBASIC18.65■□□□□ 0.58
EPHA4P54764 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.65■□□□□ 0.58
EPHA4P54764 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
EPHA4P54764 AC116562.4-202ENST00000641738 218 ntBASIC18.65■□□□□ 0.58
EPHA4P54764 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA4P54764 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA4P54764 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EPHA4P54764 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EPHA4P54764 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EPHA4P54764 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EPHA4P54764 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
EPHA4P54764 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.64■□□□□ 0.57
EPHA4P54764 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.64■□□□□ 0.57
EPHA4P54764 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EPHA4P54764 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.64■□□□□ 0.57
EPHA4P54764 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
EPHA4P54764 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.64■□□□□ 0.57
EPHA4P54764 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.64■□□□□ 0.57
EPHA4P54764 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.64■□□□□ 0.57
EPHA4P54764 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EPHA4P54764 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.64■□□□□ 0.57
EPHA4P54764 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.64■□□□□ 0.57
EPHA4P54764 TCF3P1-201ENST00000423021 1937 ntBASIC18.64■□□□□ 0.57
EPHA4P54764 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 AC073508.3-201ENST00000619697 1419 ntBASIC18.64■□□□□ 0.57
EPHA4P54764 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.64■□□□□ 0.57
EPHA4P54764 KRT8P41-201ENST00000533985 1514 ntBASIC18.64■□□□□ 0.57
EPHA4P54764 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.64■□□□□ 0.57
EPHA4P54764 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA4P54764 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.63■□□□□ 0.57
EPHA4P54764 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA4P54764 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA4P54764 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
EPHA4P54764 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA4P54764 AC007952.6-201ENST00000573168 2673 ntBASIC18.63■□□□□ 0.57
EPHA4P54764 AC003957.1-201ENST00000625108 2673 ntBASIC18.63■□□□□ 0.57
EPHA4P54764 AL391422.3-201ENST00000603791 2761 ntBASIC18.63■□□□□ 0.57
EPHA4P54764 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA4P54764 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA4P54764 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.63■□□□□ 0.57
EPHA4P54764 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.63■□□□□ 0.57
EPHA4P54764 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms