Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LIMK1P53667 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.17■□□□□ 0.66
LIMK1P53667 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.17■□□□□ 0.66
LIMK1P53667 AL441883.1-201ENST00000566170 1045 ntBASIC19.17■□□□□ 0.66
LIMK1P53667 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
LIMK1P53667 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LIMK1P53667 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.17■□□□□ 0.66
LIMK1P53667 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LIMK1P53667 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.17■□□□□ 0.66
LIMK1P53667 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LIMK1P53667 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LIMK1P53667 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LIMK1P53667 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.16■□□□□ 0.66
LIMK1P53667 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.16■□□□□ 0.66
LIMK1P53667 TUBB8P6-201ENST00000436895 1288 ntBASIC19.16■□□□□ 0.66
LIMK1P53667 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.16■□□□□ 0.66
LIMK1P53667 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.16■□□□□ 0.66
LIMK1P53667 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LIMK1P53667 AL353719.1-201ENST00000566847 864 ntBASIC19.16■□□□□ 0.66
LIMK1P53667 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.16■□□□□ 0.66
LIMK1P53667 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.16■□□□□ 0.66
LIMK1P53667 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK1P53667 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LIMK1P53667 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK1P53667 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 PVRIG2P-201ENST00000435460 978 ntBASIC19.15■□□□□ 0.66
LIMK1P53667 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK1P53667 AC008040.2-201ENST00000461049 708 ntBASIC19.15■□□□□ 0.66
LIMK1P53667 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK1P53667 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK1P53667 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.15■□□□□ 0.66
LIMK1P53667 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
LIMK1P53667 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.15■□□□□ 0.66
LIMK1P53667 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK1P53667 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 AC006538.3-201ENST00000612495 578 ntBASIC19.15■□□□□ 0.66
LIMK1P53667 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK1P53667 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK1P53667 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
LIMK1P53667 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LIMK1P53667 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.14■□□□□ 0.66
LIMK1P53667 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.14■□□□□ 0.66
LIMK1P53667 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.14■□□□□ 0.65
LIMK1P53667 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LIMK1P53667 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIMK1P53667 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIMK1P53667 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIMK1P53667 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.14■□□□□ 0.65
LIMK1P53667 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK1P53667 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LIMK1P53667 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK1P53667 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms