Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPAP53621 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COPAP53621 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.99■□□□□ 0.79
COPAP53621 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPAP53621 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.99■□□□□ 0.79
COPAP53621 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPAP53621 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COPAP53621 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.98■□□□□ 0.79
COPAP53621 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.98■□□□□ 0.79
COPAP53621 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.98■□□□□ 0.79
COPAP53621 KRT18P21-201ENST00000515767 1272 ntBASIC19.98■□□□□ 0.79
COPAP53621 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
COPAP53621 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.98■□□□□ 0.79
COPAP53621 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.98■□□□□ 0.79
COPAP53621 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.98■□□□□ 0.79
COPAP53621 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
COPAP53621 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COPAP53621 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPAP53621 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.98■□□□□ 0.79
COPAP53621 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.98■□□□□ 0.79
COPAP53621 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.97■□□□□ 0.79
COPAP53621 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COPAP53621 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.97■□□□□ 0.79
COPAP53621 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COPAP53621 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.97■□□□□ 0.79
COPAP53621 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.97■□□□□ 0.79
COPAP53621 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 REXO1L10P-201ENST00000615707 1290 ntBASIC19.97■□□□□ 0.79
COPAP53621 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COPAP53621 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.97■□□□□ 0.79
COPAP53621 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COPAP53621 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.97■□□□□ 0.79
COPAP53621 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPAP53621 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COPAP53621 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPAP53621 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPAP53621 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
COPAP53621 MMP23A-201ENST00000234610 1017 ntBASIC19.96■□□□□ 0.79
COPAP53621 NIFKP9-201ENST00000419265 221 ntBASIC19.96■□□□□ 0.79
COPAP53621 RBM17P1-201ENST00000453646 1190 ntBASIC19.96■□□□□ 0.79
COPAP53621 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.96■□□□□ 0.79
COPAP53621 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPAP53621 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.96■□□□□ 0.79
COPAP53621 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.96■□□□□ 0.79
COPAP53621 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.96■□□□□ 0.79
COPAP53621 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.96■□□□□ 0.79
COPAP53621 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COPAP53621 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COPAP53621 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPAP53621 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPAP53621 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.79
COPAP53621 BX323043.1-201ENST00000641006 1765 ntBASIC19.95■□□□□ 0.78
COPAP53621 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COPAP53621 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.95■□□□□ 0.78
COPAP53621 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.95■□□□□ 0.78
COPAP53621 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.95■□□□□ 0.78
COPAP53621 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.95■□□□□ 0.78
COPAP53621 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COPAP53621 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COPAP53621 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.95■□□□□ 0.78
COPAP53621 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.95■□□□□ 0.78
COPAP53621 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.95■□□□□ 0.78
COPAP53621 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.95■□□□□ 0.78
COPAP53621 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.95■□□□□ 0.78
COPAP53621 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPAP53621 AC116351.2-201ENST00000606540 1585 ntBASIC19.95■□□□□ 0.78
COPAP53621 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COPAP53621 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COPAP53621 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 AC092720.2-201ENST00000602388 1665 ntBASIC19.94■□□□□ 0.78
COPAP53621 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COPAP53621 AC079598.2-202ENST00000546624 1451 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms