Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.03■□□□□ 0.64
CLCNKAP51800 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.03■□□□□ 0.64
CLCNKAP51800 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCNKAP51800 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CLCNKAP51800 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLCNKAP51800 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCNKAP51800 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCNKAP51800 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCNKAP51800 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCNKAP51800 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 MESTP1-201ENST00000404287 994 ntBASIC19.02■□□□□ 0.64
CLCNKAP51800 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 RBM17P1-201ENST00000453646 1190 ntBASIC19.02■□□□□ 0.64
CLCNKAP51800 TSPY15P-201ENST00000457163 923 ntBASIC19.02■□□□□ 0.64
CLCNKAP51800 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.02■□□□□ 0.64
CLCNKAP51800 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCNKAP51800 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLCNKAP51800 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLCNKAP51800 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCNKAP51800 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCNKAP51800 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCNKAP51800 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCNKAP51800 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCNKAP51800 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CLCNKAP51800 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLCNKAP51800 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.02■□□□□ 0.63
CLCNKAP51800 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCNKAP51800 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 UNC93B2-201ENST00000285383 730 ntBASIC19.01■□□□□ 0.63
CLCNKAP51800 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLCNKAP51800 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCNKAP51800 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCNKAP51800 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCNKAP51800 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCNKAP51800 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCNKAP51800 MIR6786-201ENST00000616843 113 ntBASIC19.01■□□□□ 0.63
CLCNKAP51800 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCNKAP51800 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLCNKAP51800 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLCNKAP51800 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCNKAP51800 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCNKAP51800 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCNKAP51800 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19■□□□□ 0.63
CLCNKAP51800 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLCNKAP51800 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 B3GAT3P1-201ENST00000471720 806 ntBASIC19■□□□□ 0.63
CLCNKAP51800 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19■□□□□ 0.63
CLCNKAP51800 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19■□□□□ 0.63
CLCNKAP51800 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19■□□□□ 0.63
CLCNKAP51800 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 DGCR10-201ENST00000609839 495 ntBASIC19■□□□□ 0.63
CLCNKAP51800 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19■□□□□ 0.63
CLCNKAP51800 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19■□□□□ 0.63
CLCNKAP51800 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLCNKAP51800 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCNKAP51800 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CLCNKAP51800 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCNKAP51800 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCNKAP51800 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCNKAP51800 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CLCNKAP51800 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCNKAP51800 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCNKAP51800 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms