Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 AIRN-201ENST00000601203 4374 ntBASIC18.75■□□□□ 0.59
RAB28P51157 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.75■□□□□ 0.59
RAB28P51157 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 AC004980.1-204ENST00000429707 299 ntBASIC18.75■□□□□ 0.59
RAB28P51157 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB28P51157 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 AL160286.2-201ENST00000567150 934 ntBASIC18.75■□□□□ 0.59
RAB28P51157 MIR4785-201ENST00000585005 73 ntBASIC18.75■□□□□ 0.59
RAB28P51157 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB28P51157 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB28P51157 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB28P51157 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB28P51157 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB28P51157 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
RAB28P51157 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB28P51157 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB28P51157 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB28P51157 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB28P51157 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB28P51157 TSPY7P-201ENST00000431358 1114 ntBASIC18.74■□□□□ 0.59
RAB28P51157 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB28P51157 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB28P51157 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB28P51157 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB28P51157 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB28P51157 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB28P51157 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB28P51157 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB28P51157 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB28P51157 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB28P51157 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RAB28P51157 AL596275.1-201ENST00000423464 877 ntBASIC18.73■□□□□ 0.59
RAB28P51157 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAB28P51157 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB28P51157 NUDT16P1-203ENST00000513809 620 ntBASIC18.73■□□□□ 0.59
RAB28P51157 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB28P51157 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB28P51157 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB28P51157 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB28P51157 AC026471.5-201ENST00000615068 467 ntBASIC18.73■□□□□ 0.59
RAB28P51157 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.73■□□□□ 0.59
RAB28P51157 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB28P51157 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB28P51157 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB28P51157 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
RAB28P51157 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB28P51157 AC104417.2-201ENST00000562989 1793 ntBASIC18.73■□□□□ 0.59
RAB28P51157 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB28P51157 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB28P51157 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB28P51157 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 LINC01465-201ENST00000408887 1940 ntBASIC18.72■□□□□ 0.59
RAB28P51157 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB28P51157 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 AL355355.2-201ENST00000442321 338 ntBASIC18.72■□□□□ 0.59
RAB28P51157 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.72■□□□□ 0.59
RAB28P51157 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAB28P51157 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms