Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 ESRRAP1-201ENST00000400596 1257 ntBASIC18■□□□□ 0.47
RNF144AP50876 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18■□□□□ 0.47
RNF144AP50876 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RNF144AP50876 CD99P1-205ENST00000527459 561 ntBASIC18■□□□□ 0.47
RNF144AP50876 AL121906.2-201ENST00000621597 723 ntBASIC18■□□□□ 0.47
RNF144AP50876 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18■□□□□ 0.47
RNF144AP50876 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18■□□□□ 0.47
RNF144AP50876 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RNF144AP50876 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RNF144AP50876 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF144AP50876 AP006587.1-201ENST00000534129 1502 ntBASIC17.99■□□□□ 0.47
RNF144AP50876 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF144AP50876 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF144AP50876 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF144AP50876 POM121L13P-201ENST00000422362 380 ntBASIC17.99■□□□□ 0.47
RNF144AP50876 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF144AP50876 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF144AP50876 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF144AP50876 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RNF144AP50876 AC005332.7-201ENST00000614046 2005 ntBASIC17.99■□□□□ 0.47
RNF144AP50876 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF144AP50876 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
RNF144AP50876 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF144AP50876 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF144AP50876 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF144AP50876 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF144AP50876 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF144AP50876 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF144AP50876 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RNF144AP50876 AC026366.1-201ENST00000488803 879 ntBASIC17.98■□□□□ 0.47
RNF144AP50876 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
RNF144AP50876 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF144AP50876 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF144AP50876 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF144AP50876 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.98■□□□□ 0.47
RNF144AP50876 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF144AP50876 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF144AP50876 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF144AP50876 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF144AP50876 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF144AP50876 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF144AP50876 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF144AP50876 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF144AP50876 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 AC069544.1-201ENST00000609399 999 ntBASIC17.97■□□□□ 0.47
RNF144AP50876 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.97■□□□□ 0.47
RNF144AP50876 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF144AP50876 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms