Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KNTC1P50748 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.43■□□□□ 0.54
KNTC1P50748 KRT18P38-201ENST00000449496 1282 ntBASIC18.43■□□□□ 0.54
KNTC1P50748 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.43■□□□□ 0.54
KNTC1P50748 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.43■□□□□ 0.54
KNTC1P50748 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 LINC01465-201ENST00000408887 1940 ntBASIC18.43■□□□□ 0.54
KNTC1P50748 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
KNTC1P50748 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.43■□□□□ 0.54
KNTC1P50748 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KNTC1P50748 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KNTC1P50748 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.43■□□□□ 0.54
KNTC1P50748 KRT8P45-201ENST00000414328 1447 ntBASIC18.43■□□□□ 0.54
KNTC1P50748 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.43■□□□□ 0.54
KNTC1P50748 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KNTC1P50748 ECEL1P1-201ENST00000373592 1742 ntBASIC18.42■□□□□ 0.54
KNTC1P50748 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.42■□□□□ 0.54
KNTC1P50748 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.42■□□□□ 0.54
KNTC1P50748 ZNF444P1-201ENST00000559497 298 ntBASIC18.42■□□□□ 0.54
KNTC1P50748 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.42■□□□□ 0.54
KNTC1P50748 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.42■□□□□ 0.54
KNTC1P50748 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.42■□□□□ 0.54
KNTC1P50748 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.42■□□□□ 0.54
KNTC1P50748 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.42■□□□□ 0.54
KNTC1P50748 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.42■□□□□ 0.54
KNTC1P50748 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.42■□□□□ 0.54
KNTC1P50748 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.42■□□□□ 0.54
KNTC1P50748 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.42■□□□□ 0.54
KNTC1P50748 CKBP1-201ENST00000565489 1086 ntBASIC18.42■□□□□ 0.54
KNTC1P50748 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
KNTC1P50748 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.42■□□□□ 0.54
KNTC1P50748 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KNTC1P50748 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KNTC1P50748 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KNTC1P50748 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 AC112907.2-201ENST00000448639 330 ntBASIC18.41■□□□□ 0.54
KNTC1P50748 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.41■□□□□ 0.54
KNTC1P50748 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.41■□□□□ 0.54
KNTC1P50748 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.41■□□□□ 0.54
KNTC1P50748 NPAP1P7-201ENST00000613027 823 ntBASIC18.41■□□□□ 0.54
KNTC1P50748 AC023511.2-201ENST00000618803 211 ntBASIC18.41■□□□□ 0.54
KNTC1P50748 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.41■□□□□ 0.54
KNTC1P50748 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KNTC1P50748 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
KNTC1P50748 IFNL4P1-201ENST00000607083 540 ntBASIC18.41■□□□□ 0.54
KNTC1P50748 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.41■□□□□ 0.54
KNTC1P50748 FEM1AP1-201ENST00000431297 1995 ntBASIC18.4■□□□□ 0.54
KNTC1P50748 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 AP003041.3-201ENST00000527151 707 ntBASIC18.4■□□□□ 0.54
KNTC1P50748 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.4■□□□□ 0.54
KNTC1P50748 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
KNTC1P50748 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
KNTC1P50748 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KNTC1P50748 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
KNTC1P50748 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
KNTC1P50748 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.54
KNTC1P50748 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.39■□□□□ 0.54
KNTC1P50748 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.39■□□□□ 0.54
KNTC1P50748 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.39■□□□□ 0.54
KNTC1P50748 UNC93B7-201ENST00000509439 705 ntBASIC18.39■□□□□ 0.54
KNTC1P50748 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.39■□□□□ 0.54
KNTC1P50748 AC012313.10-201ENST00000623509 926 ntBASIC18.39■□□□□ 0.54
KNTC1P50748 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
KNTC1P50748 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.39■□□□□ 0.53
KNTC1P50748 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms