Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRP9P49458 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
SRP9P49458 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP9P49458 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.17■□□□□ 0.34
SRP9P49458 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.16■□□□□ 0.34
SRP9P49458 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP9P49458 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 BX119927.1-201ENST00000636596 1552 ntBASIC17.16■□□□□ 0.34
SRP9P49458 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP9P49458 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.16■□□□□ 0.34
SRP9P49458 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.16■□□□□ 0.34
SRP9P49458 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.16■□□□□ 0.34
SRP9P49458 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.16■□□□□ 0.34
SRP9P49458 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
SRP9P49458 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.16■□□□□ 0.34
SRP9P49458 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.16■□□□□ 0.34
SRP9P49458 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP9P49458 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP9P49458 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 LINC01465-201ENST00000408887 1940 ntBASIC17.15■□□□□ 0.34
SRP9P49458 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.15■□□□□ 0.34
SRP9P49458 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SRP9P49458 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.15■□□□□ 0.34
SRP9P49458 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.15■□□□□ 0.34
SRP9P49458 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.15■□□□□ 0.34
SRP9P49458 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SRP9P49458 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRP9P49458 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SRP9P49458 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRP9P49458 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.14■□□□□ 0.33
SRP9P49458 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.14■□□□□ 0.33
SRP9P49458 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SRP9P49458 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.14■□□□□ 0.33
SRP9P49458 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.14■□□□□ 0.33
SRP9P49458 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.14■□□□□ 0.33
SRP9P49458 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SRP9P49458 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SRP9P49458 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SRP9P49458 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.14■□□□□ 0.33
SRP9P49458 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.14■□□□□ 0.33
SRP9P49458 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRP9P49458 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
SRP9P49458 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
SRP9P49458 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms