Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.87■□□□□ 0.61
GDF5P43026 KRT18P16-201ENST00000510337 1294 ntBASIC18.87■□□□□ 0.61
GDF5P43026 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.87■□□□□ 0.61
GDF5P43026 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.87■□□□□ 0.61
GDF5P43026 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
GDF5P43026 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDF5P43026 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDF5P43026 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDF5P43026 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
GDF5P43026 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.86■□□□□ 0.61
GDF5P43026 ESRRAP1-201ENST00000400596 1257 ntBASIC18.86■□□□□ 0.61
GDF5P43026 KRT17P3-201ENST00000420566 1262 ntBASIC18.86■□□□□ 0.61
GDF5P43026 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.86■□□□□ 0.61
GDF5P43026 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF5P43026 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 AC069544.1-201ENST00000609399 999 ntBASIC18.86■□□□□ 0.61
GDF5P43026 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF5P43026 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF5P43026 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GDF5P43026 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.85■□□□□ 0.61
GDF5P43026 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
GDF5P43026 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GDF5P43026 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GDF5P43026 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 SDHAP1-207ENST00000440850 2000 ntBASIC18.85■□□□□ 0.61
GDF5P43026 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.85■□□□□ 0.61
GDF5P43026 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.85■□□□□ 0.61
GDF5P43026 TUBB8P6-201ENST00000436895 1288 ntBASIC18.85■□□□□ 0.61
GDF5P43026 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.85■□□□□ 0.61
GDF5P43026 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.85■□□□□ 0.61
GDF5P43026 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.85■□□□□ 0.61
GDF5P43026 MTDHP1-201ENST00000605323 784 ntBASIC18.85■□□□□ 0.61
GDF5P43026 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GDF5P43026 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.85■□□□□ 0.61
GDF5P43026 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GDF5P43026 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.85■□□□□ 0.61
GDF5P43026 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF5P43026 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF5P43026 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF5P43026 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GDF5P43026 AC104417.2-201ENST00000562989 1793 ntBASIC18.84■□□□□ 0.61
GDF5P43026 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.84■□□□□ 0.61
GDF5P43026 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.84■□□□□ 0.61
GDF5P43026 PRKY-204ENST00000533551 1019 ntBASIC18.84■□□□□ 0.61
GDF5P43026 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.84■□□□□ 0.61
GDF5P43026 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF5P43026 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.84■□□□□ 0.61
GDF5P43026 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF5P43026 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDF5P43026 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms