Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MTHFRP42898 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MTHFRP42898 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.31■□□□□ 0.84
MTHFRP42898 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.31■□□□□ 0.84
MTHFRP42898 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.31■□□□□ 0.84
MTHFRP42898 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.31■□□□□ 0.84
MTHFRP42898 AL441883.1-201ENST00000566170 1045 ntBASIC20.31■□□□□ 0.84
MTHFRP42898 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.31■□□□□ 0.84
MTHFRP42898 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.31■□□□□ 0.84
MTHFRP42898 AL023973.1-201ENST00000624619 620 ntBASIC20.31■□□□□ 0.84
MTHFRP42898 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
MTHFRP42898 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.31■□□□□ 0.84
MTHFRP42898 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MTHFRP42898 TMEM179-206ENST00000616017 1645 ntBASIC20.31■□□□□ 0.84
MTHFRP42898 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 AC005332.1-201ENST00000577698 1310 ntBASIC20.3■□□□□ 0.84
MTHFRP42898 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
MTHFRP42898 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 KRT8P8-201ENST00000434750 1448 ntBASIC20.3■□□□□ 0.84
MTHFRP42898 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MTHFRP42898 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MTHFRP42898 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.3■□□□□ 0.84
MTHFRP42898 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.3■□□□□ 0.84
MTHFRP42898 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.3■□□□□ 0.84
MTHFRP42898 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.3■□□□□ 0.84
MTHFRP42898 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
MTHFRP42898 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MTHFRP42898 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MTHFRP42898 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
MTHFRP42898 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.29■□□□□ 0.84
MTHFRP42898 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.29■□□□□ 0.84
MTHFRP42898 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.29■□□□□ 0.84
MTHFRP42898 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.29■□□□□ 0.84
MTHFRP42898 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.29■□□□□ 0.84
MTHFRP42898 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.29■□□□□ 0.84
MTHFRP42898 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.29■□□□□ 0.84
MTHFRP42898 AC069148.1-201ENST00000608741 768 ntBASIC20.29■□□□□ 0.84
MTHFRP42898 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.29■□□□□ 0.84
MTHFRP42898 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
MTHFRP42898 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.29■□□□□ 0.84
MTHFRP42898 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
MTHFRP42898 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MTHFRP42898 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MTHFRP42898 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MTHFRP42898 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.28■□□□□ 0.84
MTHFRP42898 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MTHFRP42898 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MTHFRP42898 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MTHFRP42898 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MTHFRP42898 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.28■□□□□ 0.84
MTHFRP42898 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MTHFRP42898 PRSS44-201ENST00000515154 1146 ntBASIC20.28■□□□□ 0.84
MTHFRP42898 AL160286.2-201ENST00000567150 934 ntBASIC20.28■□□□□ 0.84
MTHFRP42898 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.28■□□□□ 0.84
MTHFRP42898 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MTHFRP42898 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MTHFRP42898 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MTHFRP42898 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MTHFRP42898 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
MTHFRP42898 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.27■□□□□ 0.84
MTHFRP42898 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 AP000523.1-201ENST00000398242 1049 ntBASIC20.27■□□□□ 0.84
MTHFRP42898 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MTHFRP42898 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.27■□□□□ 0.83
MTHFRP42898 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
MTHFRP42898 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MTHFRP42898 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MTHFRP42898 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MTHFRP42898 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MTHFRP42898 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.27■□□□□ 0.83
MTHFRP42898 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.26■□□□□ 0.83
MTHFRP42898 AC092720.2-201ENST00000602388 1665 ntBASIC20.26■□□□□ 0.83
MTHFRP42898 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.26■□□□□ 0.83
MTHFRP42898 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
MTHFRP42898 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms