Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 AC007952.6-201ENST00000573168 2673 ntBASIC15.82■□□□□ 0.12
CEACAM3P40198 AC003957.1-201ENST00000625108 2673 ntBASIC15.82■□□□□ 0.12
CEACAM3P40198 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CEACAM3P40198 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CEACAM3P40198 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.82■□□□□ 0.12
CEACAM3P40198 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.82■□□□□ 0.12
CEACAM3P40198 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.82■□□□□ 0.12
CEACAM3P40198 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CEACAM3P40198 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CEACAM3P40198 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CEACAM3P40198 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.82■□□□□ 0.12
CEACAM3P40198 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.81■□□□□ 0.12
CEACAM3P40198 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.81■□□□□ 0.12
CEACAM3P40198 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.81■□□□□ 0.12
CEACAM3P40198 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CEACAM3P40198 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CEACAM3P40198 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
CEACAM3P40198 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 GCSHP5-201ENST00000443090 522 ntBASIC15.8■□□□□ 0.12
CEACAM3P40198 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.8■□□□□ 0.12
CEACAM3P40198 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.8■□□□□ 0.12
CEACAM3P40198 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.8■□□□□ 0.12
CEACAM3P40198 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 AP006294.2-201ENST00000641667 209 ntBASIC15.8■□□□□ 0.12
CEACAM3P40198 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.8■□□□□ 0.12
CEACAM3P40198 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CEACAM3P40198 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CEACAM3P40198 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CEACAM3P40198 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.79■□□□□ 0.12
CEACAM3P40198 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CEACAM3P40198 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CEACAM3P40198 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.79■□□□□ 0.12
CEACAM3P40198 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CEACAM3P40198 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms