Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.4■□□□□ 0.54
KRT20P35900 SOX15-203ENST00000570788 1093 ntBASIC18.4■□□□□ 0.54
KRT20P35900 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT20P35900 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT20P35900 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT20P35900 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT20P35900 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT20P35900 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
KRT20P35900 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT20P35900 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT20P35900 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KRT20P35900 AL691432.2-201ENST00000607222 2038 ntBASIC18.39■□□□□ 0.53
KRT20P35900 TMEM179-206ENST00000616017 1645 ntBASIC18.39■□□□□ 0.53
KRT20P35900 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT20P35900 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT20P35900 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT20P35900 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT20P35900 CD99P1-205ENST00000527459 561 ntBASIC18.39■□□□□ 0.53
KRT20P35900 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KRT20P35900 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KRT20P35900 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT20P35900 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT20P35900 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KRT20P35900 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KRT20P35900 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
KRT20P35900 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT20P35900 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT20P35900 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT20P35900 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KRT20P35900 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KRT20P35900 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT20P35900 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT20P35900 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
KRT20P35900 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.38■□□□□ 0.53
KRT20P35900 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.38■□□□□ 0.53
KRT20P35900 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT20P35900 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT20P35900 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT20P35900 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
KRT20P35900 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT20P35900 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 AC093503.3-201ENST00000624917 2352 ntBASIC18.38■□□□□ 0.53
KRT20P35900 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT20P35900 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT20P35900 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms