Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX6P35712 AL031432.3-201ENST00000607698 485 ntBASIC17.37■□□□□ 0.37
SOX6P35712 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX6P35712 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX6P35712 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX6P35712 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX6P35712 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SOX6P35712 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SOX6P35712 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.36■□□□□ 0.37
SOX6P35712 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SOX6P35712 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SOX6P35712 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.36■□□□□ 0.37
SOX6P35712 SUDS3P1-201ENST00000505831 966 ntBASIC17.36■□□□□ 0.37
SOX6P35712 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 AL136967.2-201ENST00000623968 743 ntBASIC17.36■□□□□ 0.37
SOX6P35712 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SOX6P35712 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX6P35712 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.36■□□□□ 0.37
SOX6P35712 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX6P35712 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SOX6P35712 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SOX6P35712 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 Z98044.1-201ENST00000632503 1764 ntBASIC17.35■□□□□ 0.37
SOX6P35712 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX6P35712 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SOX6P35712 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX6P35712 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SOX6P35712 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.35■□□□□ 0.37
SOX6P35712 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SOX6P35712 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.35■□□□□ 0.37
SOX6P35712 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 AP001271.2-201ENST00000624018 1556 ntBASIC17.35■□□□□ 0.37
SOX6P35712 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.35■□□□□ 0.37
SOX6P35712 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX6P35712 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX6P35712 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SOX6P35712 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SOX6P35712 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SOX6P35712 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX6P35712 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms