Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RFC1P35251 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC1P35251 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.42■□□□□ 0.86
RFC1P35251 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.42■□□□□ 0.86
RFC1P35251 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
RFC1P35251 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC1P35251 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 NBPF21P-201ENST00000425093 1451 ntBASIC20.42■□□□□ 0.86
RFC1P35251 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC1P35251 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RFC1P35251 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC1P35251 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC1P35251 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RFC1P35251 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RFC1P35251 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.41■□□□□ 0.86
RFC1P35251 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.41■□□□□ 0.86
RFC1P35251 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.41■□□□□ 0.86
RFC1P35251 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.41■□□□□ 0.86
RFC1P35251 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFC1P35251 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFC1P35251 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RFC1P35251 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.4■□□□□ 0.86
RFC1P35251 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 ZNF815P-204ENST00000434898 1737 ntBASIC20.4■□□□□ 0.86
RFC1P35251 TUBB8P6-201ENST00000436895 1288 ntBASIC20.4■□□□□ 0.86
RFC1P35251 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC1P35251 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC1P35251 AC006058.3-201ENST00000606217 1069 ntBASIC20.4■□□□□ 0.86
RFC1P35251 AL023875.1-201ENST00000640777 796 ntBASIC20.4■□□□□ 0.86
RFC1P35251 AC073648.6-201ENST00000641589 218 ntBASIC20.4■□□□□ 0.86
RFC1P35251 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RFC1P35251 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFC1P35251 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.4■□□□□ 0.86
RFC1P35251 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFC1P35251 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFC1P35251 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RFC1P35251 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFC1P35251 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RFC1P35251 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RFC1P35251 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RFC1P35251 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 POU5F1P3-201ENST00000428824 1078 ntBASIC20.39■□□□□ 0.85
RFC1P35251 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.39■□□□□ 0.85
RFC1P35251 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.39■□□□□ 0.85
RFC1P35251 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.39■□□□□ 0.85
RFC1P35251 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC1P35251 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RFC1P35251 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC1P35251 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms