Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CTNNA1P35221 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CTNNA1P35221 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.45■□□□□ 0.86
CTNNA1P35221 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.45■□□□□ 0.86
CTNNA1P35221 AC026185.1-201ENST00000445748 174 ntBASIC20.45■□□□□ 0.86
CTNNA1P35221 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.45■□□□□ 0.86
CTNNA1P35221 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.45■□□□□ 0.86
CTNNA1P35221 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CTNNA1P35221 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.45■□□□□ 0.86
CTNNA1P35221 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.45■□□□□ 0.86
CTNNA1P35221 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNNA1P35221 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.45■□□□□ 0.86
CTNNA1P35221 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNNA1P35221 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CTNNA1P35221 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
CTNNA1P35221 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNNA1P35221 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTNNA1P35221 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNNA1P35221 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNNA1P35221 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNNA1P35221 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNNA1P35221 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.43■□□□□ 0.86
CTNNA1P35221 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.43■□□□□ 0.86
CTNNA1P35221 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.43■□□□□ 0.86
CTNNA1P35221 AL390719.1-204ENST00000412397 1219 ntBASIC20.43■□□□□ 0.86
CTNNA1P35221 CROCCP5-201ENST00000436658 830 ntBASIC20.43■□□□□ 0.86
CTNNA1P35221 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.43■□□□□ 0.86
CTNNA1P35221 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.43■□□□□ 0.86
CTNNA1P35221 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.43■□□□□ 0.86
CTNNA1P35221 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CTNNA1P35221 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CTNNA1P35221 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNNA1P35221 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.42■□□□□ 0.86
CTNNA1P35221 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.42■□□□□ 0.86
CTNNA1P35221 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CTNNA1P35221 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.42■□□□□ 0.86
CTNNA1P35221 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.42■□□□□ 0.86
CTNNA1P35221 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNNA1P35221 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.42■□□□□ 0.86
CTNNA1P35221 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
CTNNA1P35221 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNNA1P35221 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CTNNA1P35221 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNNA1P35221 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNNA1P35221 LETM1P2-201ENST00000597330 2178 ntBASIC20.41■□□□□ 0.86
CTNNA1P35221 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNNA1P35221 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNNA1P35221 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNNA1P35221 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNNA1P35221 MIPEPP3-201ENST00000412105 444 ntBASIC20.41■□□□□ 0.86
CTNNA1P35221 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNNA1P35221 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms