Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 AC079598.2-202ENST00000546624 1451 ntBASIC17.6■□□□□ 0.41
GDF1P27539 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GDF1P27539 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
GDF1P27539 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GDF1P27539 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.6■□□□□ 0.41
GDF1P27539 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.59■□□□□ 0.41
GDF1P27539 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GDF1P27539 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GDF1P27539 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GDF1P27539 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
GDF1P27539 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.59■□□□□ 0.41
GDF1P27539 AL160286.2-201ENST00000567150 934 ntBASIC17.59■□□□□ 0.41
GDF1P27539 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.59■□□□□ 0.41
GDF1P27539 PCDHAC2-203ENST00000615316 3011 ntBASIC17.59■□□□□ 0.41
GDF1P27539 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
GDF1P27539 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GDF1P27539 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.59■□□□□ 0.41
GDF1P27539 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDF1P27539 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GDF1P27539 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
GDF1P27539 RCC2P6-201ENST00000526625 1557 ntBASIC17.58■□□□□ 0.41
GDF1P27539 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.58■□□□□ 0.41
GDF1P27539 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GDF1P27539 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.58■□□□□ 0.4
GDF1P27539 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GDF1P27539 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 AC004951.3-201ENST00000418645 1148 ntBASIC17.58■□□□□ 0.4
GDF1P27539 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 AC011506.1-201ENST00000474329 610 ntBASIC17.58■□□□□ 0.4
GDF1P27539 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.58■□□□□ 0.4
GDF1P27539 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.58■□□□□ 0.4
GDF1P27539 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
GDF1P27539 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.58■□□□□ 0.4
GDF1P27539 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.58■□□□□ 0.4
GDF1P27539 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.58■□□□□ 0.4
GDF1P27539 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GDF1P27539 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDF1P27539 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
GDF1P27539 LINC01465-201ENST00000408887 1940 ntBASIC17.57■□□□□ 0.4
GDF1P27539 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
GDF1P27539 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 MESTP1-201ENST00000404287 994 ntBASIC17.57■□□□□ 0.4
GDF1P27539 AL390955.1-201ENST00000428694 934 ntBASIC17.57■□□□□ 0.4
GDF1P27539 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.57■□□□□ 0.4
GDF1P27539 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.57■□□□□ 0.4
GDF1P27539 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.57■□□□□ 0.4
GDF1P27539 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.57■□□□□ 0.4
GDF1P27539 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.57■□□□□ 0.4
GDF1P27539 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.57■□□□□ 0.4
GDF1P27539 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.57■□□□□ 0.4
GDF1P27539 DGCR10-201ENST00000609839 495 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms