Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL032819.2-201ENST00000624543 2162 ntBASIC18.11■□□□□ 0.49
CHMP24386 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP24386 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 AC026471.1-201ENST00000564629 3026 ntBASIC18.11■□□□□ 0.49
CHMP24386 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP24386 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP24386 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 PRORSD1P-201ENST00000295112 541 ntBASIC18.1■□□□□ 0.49
CHMP24386 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP24386 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP24386 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP24386 AL031963.3-201ENST00000606441 850 ntBASIC18.1■□□□□ 0.49
CHMP24386 AC073648.6-201ENST00000641589 218 ntBASIC18.1■□□□□ 0.49
CHMP24386 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CHMP24386 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP24386 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP24386 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP24386 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP24386 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP24386 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 KRT8P20-201ENST00000423953 1409 ntBASIC18.09■□□□□ 0.49
CHMP24386 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP24386 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP24386 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP24386 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP24386 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHMP24386 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP24386 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP24386 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHMP24386 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHMP24386 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP24386 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP24386 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP24386 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHMP24386 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP24386 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP24386 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHMP24386 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP24386 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP24386 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMP24386 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP24386 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CHMP24386 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP24386 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHMP24386 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CHMP24386 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP24386 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP24386 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP24386 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP24386 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.07■□□□□ 0.48
CHMP24386 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP24386 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CHMP24386 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP24386 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.07■□□□□ 0.48
CHMP24386 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP24386 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms