Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN1P18031 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN1P18031 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN1P18031 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN1P18031 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN1P18031 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN1P18031 RBM17P1-201ENST00000453646 1190 ntBASIC20.56■□□□□ 0.88
PTPN1P18031 B3GAT3P1-201ENST00000471720 806 ntBASIC20.56■□□□□ 0.88
PTPN1P18031 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.56■□□□□ 0.88
PTPN1P18031 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN1P18031 BX088651.1-201ENST00000540551 451 ntBASIC20.56■□□□□ 0.88
PTPN1P18031 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN1P18031 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN1P18031 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN1P18031 TREX1-205ENST00000625293 1783 ntBASIC20.56■□□□□ 0.88
PTPN1P18031 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN1P18031 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN1P18031 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PTPN1P18031 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTPN1P18031 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN1P18031 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN1P18031 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN1P18031 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.55■□□□□ 0.88
PTPN1P18031 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN1P18031 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PTPN1P18031 Z85996.1-201ENST00000494644 937 ntBASIC20.55■□□□□ 0.88
PTPN1P18031 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN1P18031 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN1P18031 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN1P18031 AC130371.2-201ENST00000619443 611 ntBASIC20.55■□□□□ 0.88
PTPN1P18031 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PTPN1P18031 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN1P18031 RCC2P6-201ENST00000526625 1557 ntBASIC20.55■□□□□ 0.88
PTPN1P18031 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN1P18031 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN1P18031 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN1P18031 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN1P18031 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN1P18031 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PTPN1P18031 UNC93B2-201ENST00000285383 730 ntBASIC20.54■□□□□ 0.88
PTPN1P18031 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PTPN1P18031 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTPN1P18031 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.54■□□□□ 0.88
PTPN1P18031 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.54■□□□□ 0.88
PTPN1P18031 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN1P18031 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN1P18031 AC079598.2-202ENST00000546624 1451 ntBASIC20.54■□□□□ 0.88
PTPN1P18031 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN1P18031 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN1P18031 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN1P18031 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN1P18031 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPN1P18031 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPN1P18031 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PTPN1P18031 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN1P18031 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PTPN1P18031 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN1P18031 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN1P18031 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN1P18031 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN1P18031 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN1P18031 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN1P18031 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN1P18031 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 AC004951.3-201ENST00000418645 1148 ntBASIC20.52■□□□□ 0.88
PTPN1P18031 AC008040.2-201ENST00000461049 708 ntBASIC20.52■□□□□ 0.88
PTPN1P18031 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN1P18031 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN1P18031 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 AC011298.2-201ENST00000617989 482 ntBASIC20.52■□□□□ 0.88
PTPN1P18031 AC073912.3-201ENST00000624414 853 ntBASIC20.52■□□□□ 0.88
PTPN1P18031 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPN1P18031 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN1P18031 ZNF815P-204ENST00000434898 1737 ntBASIC20.52■□□□□ 0.88
PTPN1P18031 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN1P18031 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN1P18031 AC104417.2-201ENST00000562989 1793 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms