Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
CHRNB2P17787 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CHRNB2P17787 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 AC004408.2-201ENST00000623613 2777 ntBASIC20.57■□□□□ 0.88
CHRNB2P17787 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHRNB2P17787 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNB2P17787 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNB2P17787 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNB2P17787 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHRNB2P17787 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.56■□□□□ 0.88
CHRNB2P17787 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 ESRRAP1-201ENST00000400596 1257 ntBASIC20.56■□□□□ 0.88
CHRNB2P17787 KRT17P3-201ENST00000420566 1262 ntBASIC20.56■□□□□ 0.88
CHRNB2P17787 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.56■□□□□ 0.88
CHRNB2P17787 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB2P17787 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.55■□□□□ 0.88
CHRNB2P17787 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHRNB2P17787 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHRNB2P17787 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHRNB2P17787 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 PRKY-204ENST00000533551 1019 ntBASIC20.55■□□□□ 0.88
CHRNB2P17787 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CHRNB2P17787 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB2P17787 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB2P17787 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHRNB2P17787 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHRNB2P17787 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNB2P17787 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNB2P17787 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB2P17787 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB2P17787 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRNB2P17787 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB2P17787 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNB2P17787 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms