Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL4P13236 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 AC009237.14-201ENST00000609975 1594 ntBASIC18.32■□□□□ 0.52
CCL4P13236 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL4P13236 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL4P13236 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL4P13236 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL4P13236 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.31■□□□□ 0.52
CCL4P13236 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL4P13236 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL4P13236 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL4P13236 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCL4P13236 AL441883.1-201ENST00000566170 1045 ntBASIC18.31■□□□□ 0.52
CCL4P13236 AL512604.3-201ENST00000569583 964 ntBASIC18.31■□□□□ 0.52
CCL4P13236 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.31■□□□□ 0.52
CCL4P13236 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL4P13236 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL4P13236 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL4P13236 KRT8P45-201ENST00000414328 1447 ntBASIC18.31■□□□□ 0.52
CCL4P13236 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCL4P13236 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCL4P13236 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL4P13236 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 AL359075.1-203ENST00000462729 1002 ntBASIC18.3■□□□□ 0.52
CCL4P13236 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL4P13236 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL4P13236 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL4P13236 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CCL4P13236 AL031432.5-201ENST00000641059 760 ntBASIC18.3■□□□□ 0.52
CCL4P13236 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCL4P13236 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL4P13236 AL162377.1-201ENST00000618844 1793 ntBASIC18.3■□□□□ 0.52
CCL4P13236 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL4P13236 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCL4P13236 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCL4P13236 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCL4P13236 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCL4P13236 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL4P13236 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL4P13236 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL4P13236 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 KRT8P11-201ENST00000409686 1436 ntBASIC18.29■□□□□ 0.52
CCL4P13236 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL4P13236 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL4P13236 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL4P13236 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CCL4P13236 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL4P13236 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCL4P13236 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCL4P13236 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms