Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC069544.1-201ENST00000609399 999 ntBASIC17.92■□□□□ 0.46
UBL4AP11441 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
UBL4AP11441 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.91■□□□□ 0.46
UBL4AP11441 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UBL4AP11441 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBL4AP11441 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL4AP11441 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.91■□□□□ 0.46
UBL4AP11441 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.91■□□□□ 0.46
UBL4AP11441 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.91■□□□□ 0.46
UBL4AP11441 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.91■□□□□ 0.46
UBL4AP11441 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL4AP11441 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.91■□□□□ 0.46
UBL4AP11441 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL4AP11441 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBL4AP11441 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBL4AP11441 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
UBL4AP11441 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.9■□□□□ 0.46
UBL4AP11441 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UBL4AP11441 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL4AP11441 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL4AP11441 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBL4AP11441 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBL4AP11441 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.89■□□□□ 0.46
UBL4AP11441 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBL4AP11441 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBL4AP11441 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.89■□□□□ 0.45
UBL4AP11441 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 NOC2LP1-202ENST00000452600 2235 ntBASIC17.89■□□□□ 0.45
UBL4AP11441 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.89■□□□□ 0.45
UBL4AP11441 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL4AP11441 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBL4AP11441 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UBL4AP11441 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBL4AP11441 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBL4AP11441 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.88■□□□□ 0.45
UBL4AP11441 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.88■□□□□ 0.45
UBL4AP11441 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 AC005082.1-201ENST00000413042 2259 ntBASIC17.88■□□□□ 0.45
UBL4AP11441 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.88■□□□□ 0.45
UBL4AP11441 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
UBL4AP11441 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.88■□□□□ 0.45
UBL4AP11441 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.88■□□□□ 0.45
UBL4AP11441 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL4AP11441 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.88■□□□□ 0.45
UBL4AP11441 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms