Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LAMP1P11279 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.36■□□□□ 0.53
LAMP1P11279 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 KRT8P8-201ENST00000434750 1448 ntBASIC18.36■□□□□ 0.53
LAMP1P11279 AC069152.1-201ENST00000438030 544 ntBASIC18.36■□□□□ 0.53
LAMP1P11279 SDHAP1-207ENST00000440850 2000 ntBASIC18.36■□□□□ 0.53
LAMP1P11279 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.36■□□□□ 0.53
LAMP1P11279 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LAMP1P11279 AC104417.2-201ENST00000562989 1793 ntBASIC18.36■□□□□ 0.53
LAMP1P11279 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.36■□□□□ 0.53
LAMP1P11279 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
LAMP1P11279 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.36■□□□□ 0.53
LAMP1P11279 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 AC133041.1-202ENST00000642053 222 ntBASIC18.36■□□□□ 0.53
LAMP1P11279 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.36■□□□□ 0.53
LAMP1P11279 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LAMP1P11279 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.35■□□□□ 0.53
LAMP1P11279 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LAMP1P11279 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
LAMP1P11279 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.35■□□□□ 0.53
LAMP1P11279 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LAMP1P11279 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LAMP1P11279 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LAMP1P11279 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.35■□□□□ 0.53
LAMP1P11279 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
LAMP1P11279 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.35■□□□□ 0.53
LAMP1P11279 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.35■□□□□ 0.53
LAMP1P11279 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.35■□□□□ 0.53
LAMP1P11279 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.35■□□□□ 0.53
LAMP1P11279 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.35■□□□□ 0.53
LAMP1P11279 AC104771.1-201ENST00000603335 964 ntBASIC18.35■□□□□ 0.53
LAMP1P11279 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LAMP1P11279 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.35■□□□□ 0.53
LAMP1P11279 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LAMP1P11279 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LAMP1P11279 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LAMP1P11279 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LAMP1P11279 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LAMP1P11279 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.34■□□□□ 0.53
LAMP1P11279 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.34■□□□□ 0.53
LAMP1P11279 AC142086.2-201ENST00000569753 217 ntBASIC18.34■□□□□ 0.53
LAMP1P11279 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.34■□□□□ 0.53
LAMP1P11279 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.34■□□□□ 0.53
LAMP1P11279 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.34■□□□□ 0.53
LAMP1P11279 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LAMP1P11279 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.34■□□□□ 0.53
LAMP1P11279 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LAMP1P11279 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LAMP1P11279 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMP1P11279 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMP1P11279 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.33■□□□□ 0.53
LAMP1P11279 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.33■□□□□ 0.53
LAMP1P11279 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LAMP1P11279 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.33■□□□□ 0.53
LAMP1P11279 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMP1P11279 AIRN-201ENST00000601203 4374 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms