Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.99■□□□□ 0.31
UBCP0CG48 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.99■□□□□ 0.31
UBCP0CG48 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.99■□□□□ 0.31
UBCP0CG48 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBCP0CG48 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBCP0CG48 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 HCG11-201ENST00000411553 5696 ntBASIC16.99■□□□□ 0.31
UBCP0CG48 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.99■□□□□ 0.31
UBCP0CG48 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.99■□□□□ 0.31
UBCP0CG48 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.98■□□□□ 0.31
UBCP0CG48 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.98■□□□□ 0.31
UBCP0CG48 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBCP0CG48 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.98■□□□□ 0.31
UBCP0CG48 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.98■□□□□ 0.31
UBCP0CG48 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBCP0CG48 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.98■□□□□ 0.31
UBCP0CG48 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UBCP0CG48 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.98■□□□□ 0.31
UBCP0CG48 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.98■□□□□ 0.31
UBCP0CG48 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBCP0CG48 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UBCP0CG48 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 AC004911.1-201ENST00000416316 871 ntBASIC16.97■□□□□ 0.31
UBCP0CG48 AF201337.1-201ENST00000520239 748 ntBASIC16.97■□□□□ 0.31
UBCP0CG48 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.97■□□□□ 0.31
UBCP0CG48 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.97■□□□□ 0.31
UBCP0CG48 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBCP0CG48 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UBCP0CG48 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.97■□□□□ 0.31
UBCP0CG48 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBCP0CG48 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
UBCP0CG48 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UBCP0CG48 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBCP0CG48 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.96■□□□□ 0.31
UBCP0CG48 BX276092.2-201ENST00000417668 665 ntBASIC16.96■□□□□ 0.31
UBCP0CG48 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.96■□□□□ 0.31
UBCP0CG48 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.96■□□□□ 0.31
UBCP0CG48 AC105036.2-201ENST00000569468 176 ntBASIC16.96■□□□□ 0.31
UBCP0CG48 AC005829.2-201ENST00000571422 1056 ntBASIC16.96■□□□□ 0.31
UBCP0CG48 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.96■□□□□ 0.31
UBCP0CG48 AC022517.1-201ENST00000592429 346 ntBASIC16.96■□□□□ 0.31
UBCP0CG48 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.96■□□□□ 0.31
UBCP0CG48 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UBCP0CG48 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.96■□□□□ 0.31
UBCP0CG48 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
UBCP0CG48 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBCP0CG48 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
UBCP0CG48 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
UBCP0CG48 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms