Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.41■□□□□ 0.54
CTSBP07858 AC097493.4-201ENST00000641197 219 ntBASIC18.41■□□□□ 0.54
CTSBP07858 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSBP07858 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.41■□□□□ 0.54
CTSBP07858 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSBP07858 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSBP07858 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTSBP07858 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSBP07858 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSBP07858 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 AC104417.2-201ENST00000562989 1793 ntBASIC18.4■□□□□ 0.54
CTSBP07858 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
CTSBP07858 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSBP07858 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.4■□□□□ 0.54
CTSBP07858 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.4■□□□□ 0.54
CTSBP07858 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CTSBP07858 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSBP07858 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.4■□□□□ 0.54
CTSBP07858 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSBP07858 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.4■□□□□ 0.54
CTSBP07858 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSBP07858 AC097488.1-201ENST00000507834 756 ntBASIC18.4■□□□□ 0.54
CTSBP07858 LINC01023-201ENST00000606054 436 ntBASIC18.4■□□□□ 0.54
CTSBP07858 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.4■□□□□ 0.54
CTSBP07858 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.4■□□□□ 0.54
CTSBP07858 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSBP07858 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSBP07858 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.39■□□□□ 0.54
CTSBP07858 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTSBP07858 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CTSBP07858 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTSBP07858 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CTSBP07858 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSBP07858 SDHAP1-207ENST00000440850 2000 ntBASIC18.39■□□□□ 0.53
CTSBP07858 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSBP07858 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 INGX-201ENST00000359239 846 ntBASIC18.39■□□□□ 0.53
CTSBP07858 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSBP07858 CRYGFP-201ENST00000418459 633 ntBASIC18.39■□□□□ 0.53
CTSBP07858 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.39■□□□□ 0.53
CTSBP07858 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSBP07858 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSBP07858 SLC25A1P4-201ENST00000567977 778 ntBASIC18.39■□□□□ 0.53
CTSBP07858 AP000692.2-201ENST00000608391 879 ntBASIC18.39■□□□□ 0.53
CTSBP07858 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CTSBP07858 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSBP07858 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSBP07858 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CTSBP07858 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSBP07858 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.38■□□□□ 0.53
CTSBP07858 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CTSBP07858 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSBP07858 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.38■□□□□ 0.53
CTSBP07858 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSBP07858 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSBP07858 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTSBP07858 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSBP07858 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSBP07858 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTSBP07858 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CTSBP07858 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSBP07858 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CTSBP07858 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTSBP07858 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSBP07858 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CTSBP07858 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CTSBP07858 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.37■□□□□ 0.53
CTSBP07858 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSBP07858 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.37■□□□□ 0.53
CTSBP07858 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSBP07858 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms