Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
APOBP04114 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
APOBP04114 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.13□□□□□ -0.47
APOBP04114 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
APOBP04114 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.13□□□□□ -0.47
APOBP04114 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.13□□□□□ -0.47
APOBP04114 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 AF106564.1-201ENST00000607058 2553 ntBASIC12.13□□□□□ -0.47
APOBP04114 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOBP04114 AC244015.2-201ENST00000616358 1861 ntBASIC12.12□□□□□ -0.47
APOBP04114 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.12□□□□□ -0.47
APOBP04114 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
APOBP04114 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
APOBP04114 AC079602.3-201ENST00000623931 403 ntBASIC12.12□□□□□ -0.47
APOBP04114 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
APOBP04114 FBXW4P1-201ENST00000426721 2239 ntBASIC12.12□□□□□ -0.47
APOBP04114 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.12□□□□□ -0.47
APOBP04114 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
APOBP04114 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
APOBP04114 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.12□□□□□ -0.47
APOBP04114 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.12□□□□□ -0.47
APOBP04114 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.12□□□□□ -0.47
APOBP04114 NUS1P1-201ENST00000446295 882 ntBASIC12.12□□□□□ -0.47
APOBP04114 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.12□□□□□ -0.47
APOBP04114 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
APOBP04114 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.12□□□□□ -0.47
APOBP04114 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
APOBP04114 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
APOBP04114 FP700111.2-201ENST00000619190 1892 ntBASIC12.12□□□□□ -0.47
APOBP04114 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOBP04114 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.12□□□□□ -0.47
APOBP04114 AC004870.1-201ENST00000315132 882 ntBASIC12.11□□□□□ -0.47
APOBP04114 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
APOBP04114 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC12.11□□□□□ -0.47
APOBP04114 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 HLA-F-220ENST00000434407 884 ntBASIC12.11□□□□□ -0.47
APOBP04114 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
APOBP04114 FOSL1P1-201ENST00000511041 816 ntBASIC12.11□□□□□ -0.47
APOBP04114 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 AC092329.2-201ENST00000598402 547 ntBASIC12.11□□□□□ -0.47
APOBP04114 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.11□□□□□ -0.47
APOBP04114 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.11□□□□□ -0.47
APOBP04114 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 KRT16P4-201ENST00000453883 522 ntBASIC12.11□□□□□ -0.47
APOBP04114 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.11□□□□□ -0.47
APOBP04114 AL160286.2-201ENST00000567150 934 ntBASIC12.11□□□□□ -0.47
APOBP04114 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.11□□□□□ -0.47
APOBP04114 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.11□□□□□ -0.47
APOBP04114 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 AC243591.1-201ENST00000452967 1364 ntBASIC12.11□□□□□ -0.47
APOBP04114 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.11□□□□□ -0.47
APOBP04114 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 AP000867.3-201ENST00000524675 377 ntBASIC12.11□□□□□ -0.47
APOBP04114 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 SMG8-203ENST00000578922 2178 ntBASIC12.11□□□□□ -0.47
APOBP04114 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.11□□□□□ -0.47
APOBP04114 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 LINC02084-201ENST00000606069 1096 ntBASIC12.11□□□□□ -0.47
APOBP04114 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms