Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 AC117947.1-201ENST00000427448 529 ntBASIC23.41■■□□□ 1.34
COL1A1P02452 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.41■■□□□ 1.34
COL1A1P02452 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.41■■□□□ 1.34
COL1A1P02452 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.41■■□□□ 1.34
COL1A1P02452 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.41■■□□□ 1.34
COL1A1P02452 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
COL1A1P02452 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 KRT8P11-201ENST00000409686 1436 ntBASIC23.4■■□□□ 1.34
COL1A1P02452 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
COL1A1P02452 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.4■■□□□ 1.34
COL1A1P02452 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A1P02452 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A1P02452 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.4■■□□□ 1.34
COL1A1P02452 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
COL1A1P02452 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A1P02452 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
COL1A1P02452 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.4■■□□□ 1.34
COL1A1P02452 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.4■■□□□ 1.34
COL1A1P02452 AL023803.3-201ENST00000615559 522 ntBASIC23.4■■□□□ 1.34
COL1A1P02452 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.4■■□□□ 1.34
COL1A1P02452 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
COL1A1P02452 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A1P02452 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A1P02452 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
COL1A1P02452 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.4■■□□□ 1.34
COL1A1P02452 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A1P02452 AC092338.2-201ENST00000568827 1415 ntBASIC23.4■■□□□ 1.34
COL1A1P02452 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.39■■□□□ 1.34
COL1A1P02452 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL1A1P02452 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL1A1P02452 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL1A1P02452 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.39■■□□□ 1.34
COL1A1P02452 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL1A1P02452 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL1A1P02452 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL1A1P02452 UPK3BP1-201ENST00000428678 509 ntBASIC23.39■■□□□ 1.34
COL1A1P02452 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.39■■□□□ 1.34
COL1A1P02452 AC007663.1-201ENST00000438948 1240 ntBASIC23.39■■□□□ 1.34
COL1A1P02452 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.39■■□□□ 1.34
COL1A1P02452 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.39■■□□□ 1.34
COL1A1P02452 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.39■■□□□ 1.34
COL1A1P02452 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
COL1A1P02452 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL1A1P02452 AC104417.2-201ENST00000562989 1793 ntBASIC23.39■■□□□ 1.33
COL1A1P02452 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL1A1P02452 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.33
COL1A1P02452 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL1A1P02452 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.39■■□□□ 1.33
COL1A1P02452 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A1P02452 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.38■■□□□ 1.33
COL1A1P02452 CKBP1-201ENST00000565489 1086 ntBASIC23.38■■□□□ 1.33
COL1A1P02452 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
COL1A1P02452 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A1P02452 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
COL1A1P02452 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
COL1A1P02452 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
COL1A1P02452 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
COL1A1P02452 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A1P02452 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
COL1A1P02452 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
COL1A1P02452 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A1P02452 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.38■■□□□ 1.33
COL1A1P02452 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A1P02452 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
COL1A1P02452 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A1P02452 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A1P02452 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
COL1A1P02452 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.37■■□□□ 1.33
COL1A1P02452 AL358472.4-201ENST00000633140 710 ntBASIC23.37■■□□□ 1.33
COL1A1P02452 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.37■■□□□ 1.33
COL1A1P02452 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A1P02452 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A1P02452 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.37■■□□□ 1.33
COL1A1P02452 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
COL1A1P02452 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A1P02452 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A1P02452 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL1A1P02452 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
COL1A1P02452 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A1P02452 LINC01521-201ENST00000504184 1943 ntBASIC23.36■■□□□ 1.33
COL1A1P02452 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A1P02452 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.36■■□□□ 1.33
COL1A1P02452 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.36■■□□□ 1.33
COL1A1P02452 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.36■■□□□ 1.33
COL1A1P02452 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A1P02452 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL1A1P02452 AL138966.2-201ENST00000621997 464 ntBASIC23.36■■□□□ 1.33
COL1A1P02452 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.36■■□□□ 1.33
COL1A1P02452 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A1P02452 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.36■■□□□ 1.33
COL1A1P02452 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms