Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DRAP01903 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DRAP01903 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DRAP01903 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HLA-DRAP01903 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DRAP01903 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DRAP01903 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DRAP01903 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 SDHAP1-207ENST00000440850 2000 ntBASIC20.85■□□□□ 0.93
HLA-DRAP01903 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 AC005332.7-201ENST00000614046 2005 ntBASIC20.85■□□□□ 0.93
HLA-DRAP01903 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 NIFKP9-201ENST00000419265 221 ntBASIC20.85■□□□□ 0.93
HLA-DRAP01903 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 AP002982.1-201ENST00000492365 877 ntBASIC20.85■□□□□ 0.93
HLA-DRAP01903 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 AL353708.3-201ENST00000610272 989 ntBASIC20.85■□□□□ 0.93
HLA-DRAP01903 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HLA-DRAP01903 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DRAP01903 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 RPS2P4-201ENST00000476944 856 ntBASIC20.84■□□□□ 0.93
HLA-DRAP01903 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 AF186192.3-201ENST00000583427 947 ntBASIC20.84■□□□□ 0.93
HLA-DRAP01903 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DRAP01903 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.84■□□□□ 0.93
HLA-DRAP01903 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DRAP01903 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.83■□□□□ 0.93
HLA-DRAP01903 AL032819.2-201ENST00000624543 2162 ntBASIC20.83■□□□□ 0.93
HLA-DRAP01903 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DRAP01903 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.83■□□□□ 0.93
HLA-DRAP01903 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DRAP01903 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DRAP01903 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DRAP01903 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DRAP01903 AL353807.1-201ENST00000427475 662 ntBASIC20.83■□□□□ 0.93
HLA-DRAP01903 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HLA-DRAP01903 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.83■□□□□ 0.93
HLA-DRAP01903 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DRAP01903 AL445675.2-201ENST00000620291 557 ntBASIC20.83■□□□□ 0.93
HLA-DRAP01903 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HLA-DRAP01903 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DRAP01903 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DRAP01903 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.83■□□□□ 0.92
HLA-DRAP01903 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DRAP01903 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HLA-DRAP01903 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HLA-DRAP01903 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DRAP01903 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms