Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.1■□□□□ 0.33
ALX3O95076 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 AC137761.2-201ENST00000561729 223 ntBASIC17.1■□□□□ 0.33
ALX3O95076 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.1■□□□□ 0.33
ALX3O95076 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.1■□□□□ 0.33
ALX3O95076 AC145350.3-201ENST00000569033 163 ntBASIC17.1■□□□□ 0.33
ALX3O95076 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.1■□□□□ 0.33
ALX3O95076 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
ALX3O95076 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX3O95076 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX3O95076 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.09■□□□□ 0.33
ALX3O95076 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.09■□□□□ 0.33
ALX3O95076 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ALX3O95076 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ALX3O95076 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 HLA-L-209ENST00000420110 1011 ntBASIC17.09■□□□□ 0.33
ALX3O95076 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX3O95076 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.09■□□□□ 0.33
ALX3O95076 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ALX3O95076 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX3O95076 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX3O95076 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX3O95076 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ALX3O95076 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.08■□□□□ 0.33
ALX3O95076 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX3O95076 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX3O95076 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX3O95076 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALX3O95076 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.08■□□□□ 0.33
ALX3O95076 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX3O95076 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.08■□□□□ 0.32
ALX3O95076 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ALX3O95076 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.08■□□□□ 0.32
ALX3O95076 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 HLA-G-202ENST00000376815 851 ntBASIC17.08■□□□□ 0.32
ALX3O95076 HLA-G-203ENST00000376818 1127 ntBASIC17.08■□□□□ 0.32
ALX3O95076 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.08■□□□□ 0.32
ALX3O95076 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 AC023632.3-201ENST00000521633 145 ntBASIC17.08■□□□□ 0.32
ALX3O95076 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.08■□□□□ 0.32
ALX3O95076 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.08■□□□□ 0.32
ALX3O95076 CYP2T3P-201ENST00000601990 817 ntBASIC17.08■□□□□ 0.32
ALX3O95076 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.08■□□□□ 0.32
ALX3O95076 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
ALX3O95076 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.08■□□□□ 0.32
ALX3O95076 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX3O95076 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.08■□□□□ 0.32
ALX3O95076 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.08■□□□□ 0.32
ALX3O95076 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.07■□□□□ 0.32
ALX3O95076 AC124067.4-201ENST00000519691 2379 ntBASIC17.07■□□□□ 0.32
ALX3O95076 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ALX3O95076 AC135050.7-201ENST00000624508 2218 ntBASIC17.07■□□□□ 0.32
ALX3O95076 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALX3O95076 AC006015.1-201ENST00000429970 570 ntBASIC17.07■□□□□ 0.32
ALX3O95076 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms