Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 UNC93B2-201ENST00000285383 730 ntBASIC19.84■□□□□ 0.77
CLDN11O75508 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 AC004951.3-201ENST00000418645 1148 ntBASIC19.84■□□□□ 0.77
CLDN11O75508 AC011506.1-201ENST00000474329 610 ntBASIC19.84■□□□□ 0.77
CLDN11O75508 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN11O75508 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN11O75508 AC130371.2-201ENST00000619443 611 ntBASIC19.84■□□□□ 0.77
CLDN11O75508 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN11O75508 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN11O75508 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN11O75508 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN11O75508 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.83■□□□□ 0.77
CLDN11O75508 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CLDN11O75508 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN11O75508 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 AC104417.2-201ENST00000562989 1793 ntBASIC19.83■□□□□ 0.77
CLDN11O75508 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN11O75508 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLDN11O75508 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLDN11O75508 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN11O75508 RBM17P1-201ENST00000453646 1190 ntBASIC19.83■□□□□ 0.77
CLDN11O75508 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN11O75508 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN11O75508 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN11O75508 DGCR10-201ENST00000609839 495 ntBASIC19.83■□□□□ 0.77
CLDN11O75508 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN11O75508 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN11O75508 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN11O75508 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CLDN11O75508 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.83■□□□□ 0.76
CLDN11O75508 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CLDN11O75508 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN11O75508 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN11O75508 TSPY15P-201ENST00000457163 923 ntBASIC19.82■□□□□ 0.76
CLDN11O75508 BX088651.1-201ENST00000540551 451 ntBASIC19.82■□□□□ 0.76
CLDN11O75508 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN11O75508 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN11O75508 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN11O75508 AC011298.2-201ENST00000617989 482 ntBASIC19.82■□□□□ 0.76
CLDN11O75508 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN11O75508 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN11O75508 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CLDN11O75508 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN11O75508 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN11O75508 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN11O75508 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN11O75508 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN11O75508 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CLDN11O75508 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN11O75508 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN11O75508 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN11O75508 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN11O75508 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN11O75508 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN11O75508 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN11O75508 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN11O75508 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN11O75508 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN11O75508 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN11O75508 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.8■□□□□ 0.76
CLDN11O75508 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms