Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.4■□□□□ 0.7
GPC4O75487 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.4■□□□□ 0.7
GPC4O75487 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.4■□□□□ 0.7
GPC4O75487 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.4■□□□□ 0.7
GPC4O75487 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC4O75487 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC4O75487 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GPC4O75487 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GPC4O75487 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
GPC4O75487 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.4■□□□□ 0.7
GPC4O75487 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC4O75487 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC4O75487 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GPC4O75487 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.39■□□□□ 0.7
GPC4O75487 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GPC4O75487 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.7
GPC4O75487 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.39■□□□□ 0.69
GPC4O75487 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC4O75487 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
GPC4O75487 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GPC4O75487 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC4O75487 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.39■□□□□ 0.69
GPC4O75487 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GPC4O75487 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.39■□□□□ 0.69
GPC4O75487 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC4O75487 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC4O75487 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC4O75487 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
GPC4O75487 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 ESRRAP1-201ENST00000400596 1257 ntBASIC19.38■□□□□ 0.69
GPC4O75487 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC4O75487 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC4O75487 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GPC4O75487 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
GPC4O75487 MIR4651-201ENST00000582622 73 ntBASIC19.38■□□□□ 0.69
GPC4O75487 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GPC4O75487 AL121829.2-201ENST00000620908 328 ntBASIC19.38■□□□□ 0.69
GPC4O75487 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC4O75487 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC4O75487 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC4O75487 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC4O75487 AC093484.2-201ENST00000580996 2166 ntBASIC19.37■□□□□ 0.69
GPC4O75487 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.37■□□□□ 0.69
GPC4O75487 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC4O75487 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC4O75487 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC4O75487 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GPC4O75487 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC4O75487 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC4O75487 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC4O75487 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.37■□□□□ 0.69
GPC4O75487 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC4O75487 AL121906.2-201ENST00000621597 723 ntBASIC19.37■□□□□ 0.69
GPC4O75487 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC4O75487 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC4O75487 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GPC4O75487 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC4O75487 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GPC4O75487 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GPC4O75487 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms