Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE3O75131 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE3O75131 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.59■□□□□ 0.57
CPNE3O75131 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE3O75131 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE3O75131 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE3O75131 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE3O75131 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE3O75131 AIRN-201ENST00000601203 4374 ntBASIC18.59■□□□□ 0.57
CPNE3O75131 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE3O75131 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE3O75131 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE3O75131 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE3O75131 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE3O75131 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.58■□□□□ 0.57
CPNE3O75131 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE3O75131 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE3O75131 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CPNE3O75131 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.58■□□□□ 0.57
CPNE3O75131 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE3O75131 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE3O75131 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE3O75131 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.58■□□□□ 0.57
CPNE3O75131 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE3O75131 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.58■□□□□ 0.56
CPNE3O75131 MIR1238-201ENST00000408483 83 ntBASIC18.58■□□□□ 0.56
CPNE3O75131 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.58■□□□□ 0.56
CPNE3O75131 BX119927.1-201ENST00000636596 1552 ntBASIC18.58■□□□□ 0.56
CPNE3O75131 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CPNE3O75131 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CPNE3O75131 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CPNE3O75131 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE3O75131 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE3O75131 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE3O75131 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE3O75131 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.57■□□□□ 0.56
CPNE3O75131 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.57■□□□□ 0.56
CPNE3O75131 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.57■□□□□ 0.56
CPNE3O75131 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE3O75131 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE3O75131 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 FSCN1P1-201ENST00000568912 1481 ntBASIC18.57■□□□□ 0.56
CPNE3O75131 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE3O75131 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE3O75131 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE3O75131 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE3O75131 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE3O75131 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE3O75131 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CPNE3O75131 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.56■□□□□ 0.56
CPNE3O75131 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE3O75131 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.56■□□□□ 0.56
CPNE3O75131 FITM1-202ENST00000559294 800 ntBASIC18.56■□□□□ 0.56
CPNE3O75131 AC145285.6-201ENST00000604632 637 ntBASIC18.56■□□□□ 0.56
CPNE3O75131 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CPNE3O75131 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE3O75131 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CPNE3O75131 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE3O75131 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE3O75131 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE3O75131 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CPNE3O75131 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CPNE3O75131 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms