Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHL41O60662 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHL41O60662 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 UNC93B5-201ENST00000530315 699 ntBASIC19.2■□□□□ 0.66
KLHL41O60662 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KLHL41O60662 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
KLHL41O60662 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KLHL41O60662 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHL41O60662 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL41O60662 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.19■□□□□ 0.66
KLHL41O60662 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.19■□□□□ 0.66
KLHL41O60662 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KLHL41O60662 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.19■□□□□ 0.66
KLHL41O60662 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
KLHL41O60662 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.19■□□□□ 0.66
KLHL41O60662 CYP2T3P-201ENST00000601990 817 ntBASIC19.19■□□□□ 0.66
KLHL41O60662 AC006058.3-201ENST00000606217 1069 ntBASIC19.19■□□□□ 0.66
KLHL41O60662 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL41O60662 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.19■□□□□ 0.66
KLHL41O60662 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KLHL41O60662 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 KRT8P17-201ENST00000453110 1448 ntBASIC19.18■□□□□ 0.66
KLHL41O60662 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
KLHL41O60662 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KLHL41O60662 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.18■□□□□ 0.66
KLHL41O60662 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 CYP21A1P-202ENST00000354927 1481 ntBASIC19.18■□□□□ 0.66
KLHL41O60662 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHL41O60662 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.18■□□□□ 0.66
KLHL41O60662 HLA-B-256ENST00000639848 1089 ntBASIC19.18■□□□□ 0.66
KLHL41O60662 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KLHL41O60662 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHL41O60662 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.18■□□□□ 0.66
KLHL41O60662 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL41O60662 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KLHL41O60662 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL41O60662 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.17■□□□□ 0.66
KLHL41O60662 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.17■□□□□ 0.66
KLHL41O60662 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.17■□□□□ 0.66
KLHL41O60662 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL41O60662 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.17■□□□□ 0.66
KLHL41O60662 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL41O60662 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.17■□□□□ 0.66
KLHL41O60662 AP003097.1-201ENST00000530657 1135 ntBASIC19.17■□□□□ 0.66
KLHL41O60662 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL41O60662 AC060766.5-201ENST00000590539 871 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms