Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXS1O43638 AC004951.3-201ENST00000418645 1148 ntBASIC18.28■□□□□ 0.52
FOXS1O43638 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
FOXS1O43638 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXS1O43638 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FOXS1O43638 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXS1O43638 AC073912.3-201ENST00000624414 853 ntBASIC18.28■□□□□ 0.52
FOXS1O43638 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FOXS1O43638 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXS1O43638 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXS1O43638 AL158211.5-201ENST00000623583 2518 ntBASIC18.28■□□□□ 0.52
FOXS1O43638 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
FOXS1O43638 KRT8P41-201ENST00000533985 1514 ntBASIC18.28■□□□□ 0.52
FOXS1O43638 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
FOXS1O43638 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXS1O43638 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXS1O43638 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXS1O43638 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXS1O43638 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXS1O43638 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FOXS1O43638 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
FOXS1O43638 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
FOXS1O43638 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FOXS1O43638 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
FOXS1O43638 AC091390.4-202ENST00000476426 537 ntBASIC18.27■□□□□ 0.52
FOXS1O43638 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 AP000525.1-201ENST00000608286 694 ntBASIC18.27■□□□□ 0.52
FOXS1O43638 AC011298.2-201ENST00000617989 482 ntBASIC18.27■□□□□ 0.52
FOXS1O43638 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXS1O43638 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXS1O43638 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXS1O43638 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
FOXS1O43638 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXS1O43638 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXS1O43638 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXS1O43638 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXS1O43638 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FOXS1O43638 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
FOXS1O43638 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXS1O43638 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 AP000692.2-201ENST00000608391 879 ntBASIC18.26■□□□□ 0.51
FOXS1O43638 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXS1O43638 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXS1O43638 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXS1O43638 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXS1O43638 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXS1O43638 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
FOXS1O43638 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXS1O43638 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXS1O43638 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXS1O43638 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
FOXS1O43638 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXS1O43638 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
FOXS1O43638 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXS1O43638 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXS1O43638 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXS1O43638 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXS1O43638 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 SDHAP1-207ENST00000440850 2000 ntBASIC18.24■□□□□ 0.51
FOXS1O43638 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 MMP23A-201ENST00000234610 1017 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms