Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP2AO43633 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.84■■□□□ 1.09
CHMP2AO43633 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CHMP2AO43633 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CHMP2AO43633 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
CHMP2AO43633 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.83■■□□□ 1.09
CHMP2AO43633 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.83■■□□□ 1.09
CHMP2AO43633 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.83■■□□□ 1.09
CHMP2AO43633 REXO1L10P-201ENST00000615707 1290 ntBASIC21.83■■□□□ 1.09
CHMP2AO43633 REXO1L12P-201ENST00000622156 912 ntBASIC21.83■■□□□ 1.09
CHMP2AO43633 AL031985.4-201ENST00000642138 673 ntBASIC21.83■■□□□ 1.09
CHMP2AO43633 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2AO43633 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP2AO43633 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.83■■□□□ 1.08
CHMP2AO43633 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.83■■□□□ 1.08
CHMP2AO43633 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
CHMP2AO43633 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2AO43633 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2AO43633 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
CHMP2AO43633 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2AO43633 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP2AO43633 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.82■■□□□ 1.08
CHMP2AO43633 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2AO43633 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHMP2AO43633 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHMP2AO43633 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHMP2AO43633 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHMP2AO43633 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2AO43633 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP2AO43633 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2AO43633 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP2AO43633 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP2AO43633 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHMP2AO43633 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.81■■□□□ 1.08
CHMP2AO43633 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP2AO43633 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.81■■□□□ 1.08
CHMP2AO43633 AC131212.4-201ENST00000623606 975 ntBASIC21.81■■□□□ 1.08
CHMP2AO43633 AL158211.5-201ENST00000623583 2518 ntBASIC21.81■■□□□ 1.08
CHMP2AO43633 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CHMP2AO43633 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2AO43633 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2AO43633 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2AO43633 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2AO43633 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2AO43633 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.8■■□□□ 1.08
CHMP2AO43633 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHMP2AO43633 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHMP2AO43633 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CHMP2AO43633 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP2AO43633 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHMP2AO43633 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP2AO43633 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CHMP2AO43633 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.8■■□□□ 1.08
CHMP2AO43633 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMP2AO43633 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHMP2AO43633 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP2AO43633 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2AO43633 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP2AO43633 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMP2AO43633 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2AO43633 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMP2AO43633 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2AO43633 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHMP2AO43633 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.79■■□□□ 1.08
CHMP2AO43633 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP2AO43633 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.79■■□□□ 1.08
CHMP2AO43633 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMP2AO43633 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP2AO43633 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2AO43633 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2AO43633 TREX1-205ENST00000625293 1783 ntBASIC21.79■■□□□ 1.08
CHMP2AO43633 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2AO43633 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2AO43633 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2AO43633 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP2AO43633 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2AO43633 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms