Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF9O43307 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF9O43307 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 KRT18P68-201ENST00000392293 1000 ntBASIC17.92■□□□□ 0.46
ARHGEF9O43307 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 AC098590.1-201ENST00000468126 897 ntBASIC17.92■□□□□ 0.46
ARHGEF9O43307 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF9O43307 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ARHGEF9O43307 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 HTR7P1-202ENST00000624664 4411 ntBASIC17.91■□□□□ 0.46
ARHGEF9O43307 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 AC093787.1-201ENST00000450396 207 ntBASIC17.91■□□□□ 0.46
ARHGEF9O43307 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF9O43307 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF9O43307 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.9■□□□□ 0.46
ARHGEF9O43307 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ARHGEF9O43307 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ARHGEF9O43307 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF9O43307 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.9■□□□□ 0.46
ARHGEF9O43307 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF9O43307 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF9O43307 AC005082.1-201ENST00000413042 2259 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms