Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RRP8O43159 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RRP8O43159 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
RRP8O43159 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RRP8O43159 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.23■□□□□ 0.51
RRP8O43159 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RRP8O43159 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
RRP8O43159 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.23■□□□□ 0.51
RRP8O43159 CR769767.2-201ENST00000622735 460 ntBASIC18.23■□□□□ 0.51
RRP8O43159 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RRP8O43159 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.23■□□□□ 0.51
RRP8O43159 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RRP8O43159 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.23■□□□□ 0.51
RRP8O43159 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.23■□□□□ 0.51
RRP8O43159 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RRP8O43159 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RRP8O43159 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.22■□□□□ 0.51
RRP8O43159 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.22■□□□□ 0.51
RRP8O43159 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RRP8O43159 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RRP8O43159 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RRP8O43159 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
RRP8O43159 AL845331.1-201ENST00000424978 1190 ntBASIC18.22■□□□□ 0.51
RRP8O43159 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.22■□□□□ 0.51
RRP8O43159 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 CKBP1-201ENST00000565489 1086 ntBASIC18.22■□□□□ 0.51
RRP8O43159 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 AC092329.2-201ENST00000598402 547 ntBASIC18.22■□□□□ 0.51
RRP8O43159 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.22■□□□□ 0.51
RRP8O43159 AC121338.2-201ENST00000622535 1744 ntBASIC18.22■□□□□ 0.51
RRP8O43159 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.22■□□□□ 0.51
RRP8O43159 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RRP8O43159 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.22■□□□□ 0.51
RRP8O43159 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.22■□□□□ 0.51
RRP8O43159 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
RRP8O43159 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.21■□□□□ 0.51
RRP8O43159 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
RRP8O43159 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.21■□□□□ 0.51
RRP8O43159 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 STARP1-201ENST00000397973 869 ntBASIC18.21■□□□□ 0.51
RRP8O43159 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.21■□□□□ 0.51
RRP8O43159 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.21■□□□□ 0.51
RRP8O43159 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
RRP8O43159 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RRP8O43159 AC092119.3-201ENST00000612618 583 ntBASIC18.21■□□□□ 0.51
RRP8O43159 AC083849.1-201ENST00000615227 514 ntBASIC18.21■□□□□ 0.51
RRP8O43159 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.21■□□□□ 0.51
RRP8O43159 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 KRT8P10-201ENST00000450021 1447 ntBASIC18.21■□□□□ 0.51
RRP8O43159 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.21■□□□□ 0.51
RRP8O43159 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RRP8O43159 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RRP8O43159 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RRP8O43159 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.2■□□□□ 0.5
RRP8O43159 AC005229.4-201ENST00000610085 2198 ntBASIC18.2■□□□□ 0.5
RRP8O43159 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RRP8O43159 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms