Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.26□□□□□ -0.29
NDUFA1O15239 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 TERF1P5-201ENST00000477545 1207 ntBASIC13.26□□□□□ -0.29
NDUFA1O15239 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.26□□□□□ -0.29
NDUFA1O15239 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.26□□□□□ -0.29
NDUFA1O15239 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 AC104581.1-202ENST00000635932 2618 ntBASIC13.26□□□□□ -0.29
NDUFA1O15239 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFA1O15239 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NDUFA1O15239 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFA1O15239 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NDUFA1O15239 AC090164.3-201ENST00000610780 2143 ntBASIC13.25□□□□□ -0.29
NDUFA1O15239 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.25□□□□□ -0.29
NDUFA1O15239 ZNRF2P3-201ENST00000424200 374 ntBASIC13.25□□□□□ -0.29
NDUFA1O15239 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.25□□□□□ -0.29
NDUFA1O15239 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.25□□□□□ -0.29
NDUFA1O15239 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NDUFA1O15239 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.25□□□□□ -0.29
NDUFA1O15239 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NDUFA1O15239 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NDUFA1O15239 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFA1O15239 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NDUFA1O15239 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 AC034268.1-201ENST00000441047 882 ntBASIC13.24□□□□□ -0.29
NDUFA1O15239 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.24□□□□□ -0.29
NDUFA1O15239 AL162412.1-201ENST00000567129 965 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms